Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm15000-201ENSMUST00000118275 1243 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm13501-201ENSMUST00000118477 979 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm4501-201ENSMUST00000207330 551 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm4558-201ENSMUST00000207886 521 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm9685-201ENSMUST00000211275 538 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm7443-201ENSMUST00000206355 378 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm45236-201ENSMUST00000208632 229 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm45651-201ENSMUST00000210857 335 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 AC155266.1-201ENSMUST00000220762 904 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm26075-201ENSMUST00000104062 121 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm6650-201ENSMUST00000166710 614 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm44320-201ENSMUST00000199276 86 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a3E9PWQ3 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 AC154828.1-201ENSMUST00000220696 2810 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Mir708-201ENSMUST00000102189 109 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Gm7206-201ENSMUST00000117730 508 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Gm24029-201ENSMUST00000083928 143 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Gm37090-201ENSMUST00000195694 4105 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 AC159635.1-201ENSMUST00000220905 2102 ntBASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a3E9PWQ3 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms