Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Gm17952-201ENSMUST00000193914 747 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Gm43148-201ENSMUST00000198237 520 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Gm6562-201ENSMUST00000221903 464 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Gm5830-201ENSMUST00000049117 443 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Olfr467-201ENSMUST00000084756 927 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
H2afb2S4R1M3 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm24709-201ENSMUST00000104123 132 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm22374-201ENSMUST00000104583 132 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm13428-201ENSMUST00000117540 365 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm14805-201ENSMUST00000120172 340 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm7309-201ENSMUST00000121670 581 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm12732-201ENSMUST00000121688 180 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm14237-201ENSMUST00000122080 430 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm10177-201ENSMUST00000160052 444 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm22655-201ENSMUST00000174949 96 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm38040-201ENSMUST00000193505 225 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 AC159246.1-201ENSMUST00000214478 249 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm18329-201ENSMUST00000215832 589 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 AC129323.1-201ENSMUST00000216733 470 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H2afb2S4R1M3 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm24692-201ENSMUST00000157761 146 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm2058-201ENSMUST00000178791 560 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm27219-201ENSMUST00000184633 742 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm28975-201ENSMUST00000186412 686 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm37966-201ENSMUST00000193122 326 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm29745-201ENSMUST00000198005 687 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm7499-201ENSMUST00000210423 813 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm19186-201ENSMUST00000219922 333 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms