Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Gm18598-201ENSMUST00000207724 597 ntBASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Gm17994-201ENSMUST00000209260 533 ntBASIC5.5□□□□□ -1.53
H2afb3S4R1G7 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Gm22575-201ENSMUST00000082981 110 ntBASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Gm24695-201ENSMUST00000083877 83 ntBASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.5□□□□□ -1.53
H2afb3S4R1G7 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.5□□□□□ -1.53
H2afb3S4R1G7 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm22267-201ENSMUST00000104008 131 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm14173-201ENSMUST00000117690 278 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm7058-201ENSMUST00000119209 902 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm12577-201ENSMUST00000119701 574 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm12885-201ENSMUST00000122246 328 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm23888-201ENSMUST00000122690 253 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm23553-201ENSMUST00000157817 295 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm17075-201ENSMUST00000171924 670 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm5871-201ENSMUST00000176461 718 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm27804-201ENSMUST00000185135 119 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm17934-201ENSMUST00000192818 422 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm43354-201ENSMUST00000196862 346 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Mir703-201ENSMUST00000197105 109 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 AL929265.1-201ENSMUST00000213427 125 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm23448-201ENSMUST00000083151 104 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
H2afb3S4R1G7 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms