Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm17223-201ENSMUST00000171413 481 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm25246-201ENSMUST00000175476 69 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm22852-201ENSMUST00000177899 101 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm27210-201ENSMUST00000184263 402 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Mir7072-201ENSMUST00000184542 60 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm18350-201ENSMUST00000187395 955 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm37581-201ENSMUST00000192371 988 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm44239-201ENSMUST00000204228 271 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm44539-201ENSMUST00000206010 238 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm19182-201ENSMUST00000207139 577 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm45485-201ENSMUST00000211229 357 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm45405-201ENSMUST00000211544 609 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm14805-201ENSMUST00000120172 340 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm13991-201ENSMUST00000120190 648 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm23995-201ENSMUST00000158060 129 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm8185-201ENSMUST00000160999 669 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm27602-201ENSMUST00000183861 111 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm6693-201ENSMUST00000189583 813 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm18407-201ENSMUST00000192126 790 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm42776-201ENSMUST00000198031 406 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm31211-201ENSMUST00000199170 253 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm44360-201ENSMUST00000200081 82 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm44623-201ENSMUST00000207934 434 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm18592-201ENSMUST00000221529 276 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Olfr467-201ENSMUST00000084756 927 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim3Q9R1R2 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms