Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Mir449c-201ENSMUST00000102192 109 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm23311-201ENSMUST00000104152 134 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm12140-201ENSMUST00000121214 544 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm15237-201ENSMUST00000122104 469 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm20620-201ENSMUST00000177528 168 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm37463-201ENSMUST00000193819 796 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm43148-201ENSMUST00000198237 520 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm44582-201ENSMUST00000209125 445 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm8672-201ENSMUST00000221200 332 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.6□□□□□ -1.51
Lima1Q9ERG0 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm11270-201ENSMUST00000117685 471 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm15715-201ENSMUST00000118032 283 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm9005-201ENSMUST00000119908 607 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm6446-201ENSMUST00000120604 818 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm16260-201ENSMUST00000155141 304 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm26346-201ENSMUST00000157525 329 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm23162-201ENSMUST00000175081 121 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm27512-201ENSMUST00000175328 126 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm15257-201ENSMUST00000177680 883 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm15252-201ENSMUST00000177750 883 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm15256-201ENSMUST00000177793 883 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm15260-201ENSMUST00000179402 883 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm21399-201ENSMUST00000180210 597 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm29519-201ENSMUST00000186994 398 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm3351-201ENSMUST00000193454 505 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm6631-201ENSMUST00000193699 559 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm37375-201ENSMUST00000193859 387 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm37385-201ENSMUST00000195223 387 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm43798-201ENSMUST00000202056 394 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm5990-201ENSMUST00000203126 746 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 AC137950.3-201ENSMUST00000228250 246 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm24454-201ENSMUST00000083349 132 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms