Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Gm43945-201ENSMUST00000203595 754 ntBASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Gm17988-201ENSMUST00000208796 535 ntBASIC5.43□□□□□ -1.54
Cdc40Q9DC48 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.43□□□□□ -1.54
Cdc40Q9DC48 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.43□□□□□ -1.54
Cdc40Q9DC48 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.43□□□□□ -1.54
Cdc40Q9DC48 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdc40Q9DC48 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm7927-201ENSMUST00000118818 880 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm13013-201ENSMUST00000119087 523 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm22636-201ENSMUST00000158142 275 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm24767-201ENSMUST00000158509 95 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm4845-201ENSMUST00000179202 562 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm24957-201ENSMUST00000179604 132 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm27004-201ENSMUST00000183300 727 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm18407-201ENSMUST00000192126 790 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm37196-201ENSMUST00000194762 906 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm5990-201ENSMUST00000203126 746 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm34149-201ENSMUST00000203547 304 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm44221-201ENSMUST00000203552 388 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm44768-201ENSMUST00000205719 393 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm26163-201ENSMUST00000083792 178 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm24029-201ENSMUST00000083928 143 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdc40Q9DC48 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm12077-201ENSMUST00000117049 364 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm8545-201ENSMUST00000120692 801 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm15840-201ENSMUST00000122099 943 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms