Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm13311-201ENSMUST00000117863 379 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm8761-201ENSMUST00000121507 955 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm25363-201ENSMUST00000158850 245 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm25445-201ENSMUST00000158996 299 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm21756-201ENSMUST00000178380 930 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm21405-201ENSMUST00000179024 930 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm21191-201ENSMUST00000186484 930 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm29503-201ENSMUST00000191044 930 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm45185-201ENSMUST00000207556 404 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Smc1aQ9CU62 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm14115-201ENSMUST00000119242 482 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm12768-201ENSMUST00000120055 759 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm16269-201ENSMUST00000160532 409 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm3715-201ENSMUST00000172308 617 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm22932-201ENSMUST00000175510 72 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Mir3572-201ENSMUST00000175549 86 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm7745-201ENSMUST00000182235 973 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm29592-201ENSMUST00000189434 370 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm35013-201ENSMUST00000197218 832 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm36378-201ENSMUST00000201709 388 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm4602-201ENSMUST00000203198 308 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm19196-201ENSMUST00000209258 357 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm46223-201ENSMUST00000215196 675 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms