Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 AC122357.1-201ENSMUST00000221652 1515 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 AC154681.1-201ENSMUST00000225876 1735 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Mir678-201ENSMUST00000102114 84 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm11606-201ENSMUST00000120706 617 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm22080-201ENSMUST00000157591 106 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm24685-201ENSMUST00000157764 285 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm6472-201ENSMUST00000178147 651 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm38041-201ENSMUST00000194445 661 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm17849-201ENSMUST00000219788 853 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm30155-201ENSMUST00000223458 339 ntBASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim11Q99PQ2 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Trim11Q99PQ2 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Trim11Q99PQ2 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.2
Trim11Q99PQ2 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Trim11Q99PQ2 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm15659-201ENSMUST00000118881 341 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm15149-201ENSMUST00000119370 360 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm12189-201ENSMUST00000119779 912 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Mir1903-201ENSMUST00000122574 80 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm18417-201ENSMUST00000176564 648 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm9114-201ENSMUST00000188558 997 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm37889-201ENSMUST00000194174 251 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm29950-201ENSMUST00000195273 237 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm18252-203ENSMUST00000215855 757 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm19007-201ENSMUST00000217746 874 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 AC154390.1-201ENSMUST00000225629 277 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Trim11Q99PQ2 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.58□□□□□ -1.2
Trim11Q99PQ2 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms