Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Syne4Q8CII8 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Syne4Q8CII8 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Syne4Q8CII8 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm7927-201ENSMUST00000118818 880 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm12115-201ENSMUST00000119969 447 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm12808-201ENSMUST00000120597 404 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm24295-201ENSMUST00000158298 131 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm22993-201ENSMUST00000175423 254 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm29013-201ENSMUST00000187431 237 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm29284-201ENSMUST00000188363 255 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm18969-201ENSMUST00000189423 730 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 AC153899.1-201ENSMUST00000214092 1117 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm6049-201ENSMUST00000222369 458 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gm8412-201ENSMUST00000077493 440 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.78□□□□□ -1.32
Syne4Q8CII8 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Syne4Q8CII8 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
Syne4Q8CII8 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm24142-201ENSMUST00000101960 107 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm13440-201ENSMUST00000121665 496 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm23553-201ENSMUST00000157817 295 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm23164-201ENSMUST00000175084 111 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm18445-201ENSMUST00000195502 774 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm23011-202ENSMUST00000197855 275 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm43895-201ENSMUST00000203219 855 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.77□□□□□ -1.33
Syne4Q8CII8 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Syne4Q8CII8 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms