Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm26106-201ENSMUST00000157254 228 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm22599-201ENSMUST00000157597 132 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm10177-201ENSMUST00000160052 444 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm20530-201ENSMUST00000174261 254 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm18799-201ENSMUST00000189104 913 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm37024-201ENSMUST00000192224 868 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm43779-201ENSMUST00000196691 829 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm45156-201ENSMUST00000207255 439 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm18413-201ENSMUST00000221573 655 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 AC124826.1-201ENSMUST00000221651 325 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 AC113269.1-201ENSMUST00000227185 674 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm7155-201ENSMUST00000121143 1671 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm43611-201ENSMUST00000196656 4352 ntBASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Brf1Q8CFK2 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm13641-201ENSMUST00000117993 473 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm15048-201ENSMUST00000118201 954 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm14368-201ENSMUST00000145305 415 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Mir1945-201ENSMUST00000157919 78 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm27193-201ENSMUST00000184217 586 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm18547-201ENSMUST00000192439 811 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm412-201ENSMUST00000193360 948 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm43467-201ENSMUST00000197441 437 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm42593-201ENSMUST00000198469 377 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm6366-201ENSMUST00000198766 826 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm7499-201ENSMUST00000210423 813 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm45343-201ENSMUST00000210452 828 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm8523-201ENSMUST00000211386 552 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm45850-201ENSMUST00000212536 338 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 AC161252.2-201ENSMUST00000224978 374 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 CU062626.1-201ENSMUST00000225248 505 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm45562-201ENSMUST00000210015 1537 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 AC144733.2-201ENSMUST00000222552 2292 ntBASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms