Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm24200-201ENSMUST00000082955 157 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Mir138-2-201ENSMUST00000083578 71 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm10705-201ENSMUST00000098980 461 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm11370-201ENSMUST00000120583 260 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm22420-201ENSMUST00000178795 126 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm27781-201ENSMUST00000185185 92 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm28149-201ENSMUST00000187102 378 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm28768-201ENSMUST00000189034 378 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm17952-201ENSMUST00000193914 747 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm7804-202ENSMUST00000194187 854 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm3544-201ENSMUST00000196129 305 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm31211-201ENSMUST00000199170 253 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm45343-201ENSMUST00000210452 828 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm10095-201ENSMUST00000222765 483 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm25134-201ENSMUST00000082646 160 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm25396-201ENSMUST00000103981 133 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm25346-201ENSMUST00000104509 128 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm6461-201ENSMUST00000120015 633 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm13214-201ENSMUST00000122137 408 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm15171-201ENSMUST00000122191 334 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms