Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm25666-201ENSMUST00000157702 107 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm23833-201ENSMUST00000158900 252 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm16569-201ENSMUST00000160526 314 ntBASIC8.81□□□□□ -1
Trim35Q8C006 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim35Q8C006 Gm23523-201ENSMUST00000180190 107 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.81□□□□□ -1
Trim35Q8C006 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Olfr1396-203ENSMUST00000203007 981 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim35Q8C006 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC8.81□□□□□ -1
Trim35Q8C006 Gm44307-201ENSMUST00000204466 764 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Oaz3-206ENSMUST00000204548 787 ntTSL 5 BASIC8.81□□□□□ -1
Trim35Q8C006 Prb3-ps-201ENSMUST00000204675 1111 ntBASIC8.81□□□□□ -1
Trim35Q8C006 4930441H08Rik-201ENSMUST00000205699 501 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC8.81□□□□□ -1
Trim35Q8C006 Gm7614-201ENSMUST00000222235 328 ntBASIC8.81□□□□□ -1
Trim35Q8C006 AC134468.2-201ENSMUST00000222549 672 ntBASIC8.81□□□□□ -1
Trim35Q8C006 AC134869.4-201ENSMUST00000224724 609 ntBASIC8.81□□□□□ -1
Trim35Q8C006 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.81□□□□□ -1
Trim35Q8C006 AC113178.1-201ENSMUST00000227616 935 ntBASIC8.81□□□□□ -1
Trim35Q8C006 AC137117.2-201ENSMUST00000228560 282 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Spink4-201ENSMUST00000030122 397 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Gm24622-201ENSMUST00000082619 162 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm24146-201ENSMUST00000082760 321 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm7381-201ENSMUST00000098958 300 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Gm40999-201ENSMUST00000222586 3387 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Gm37074-201ENSMUST00000193444 1843 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Trim35Q8C006 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Trim35Q8C006 Gm14258-201ENSMUST00000144607 2031 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Gm21569-201ENSMUST00000222683 2036 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Rad51ap1-201ENSMUST00000112220 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC8.81□□□□□ -1
Trim35Q8C006 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 Gm8675-201ENSMUST00000201408 1856 ntBASIC8.81□□□□□ -1
Trim35Q8C006 Cntn4-205ENSMUST00000113261 2904 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim35Q8C006 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trim35Q8C006 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Mirg-204ENSMUST00000182185 3822 ntTSL 5 BASIC8.8□□□□□ -1
Trim35Q8C006 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Thnsl1-202ENSMUST00000102951 1707 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 AC154612.1-202ENSMUST00000224806 1725 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.8□□□□□ -1
Trim35Q8C006 AC093043.2-201ENSMUST00000228616 2017 ntBASIC8.8□□□□□ -1
Trim35Q8C006 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Trim35Q8C006 Gm3618-201ENSMUST00000112726 384 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim35Q8C006 Gm15666-201ENSMUST00000118054 976 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm13005-201ENSMUST00000119518 585 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC8.8□□□□□ -1
Trim35Q8C006 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC8.8□□□□□ -1
Trim35Q8C006 Gm22893-201ENSMUST00000158637 116 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC8.8□□□□□ -1
Trim35Q8C006 Gm8711-201ENSMUST00000163114 883 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC8.8□□□□□ -1
Trim35Q8C006 Gm21965-201ENSMUST00000177770 384 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm11109-201ENSMUST00000180289 384 ntBASIC8.8□□□□□ -1
Trim35Q8C006 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Mir6356-201ENSMUST00000183541 102 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm27285-201ENSMUST00000183875 127 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm18349-201ENSMUST00000187440 904 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm2693-201ENSMUST00000189119 571 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm9696-202ENSMUST00000191541 830 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm37173-201ENSMUST00000194498 1017 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm32102-201ENSMUST00000196885 241 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Igkv12-66-201ENSMUST00000199305 348 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Gm8106-201ENSMUST00000213123 523 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC8.8□□□□□ -1
Trim35Q8C006 1700016J18Rik-201ENSMUST00000214172 249 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 AC135377.1-201ENSMUST00000223692 463 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Cacna2d3-208ENSMUST00000225985 918 ntBASIC8.8□□□□□ -1
Trim35Q8C006 AC157772.1-201ENSMUST00000226266 365 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Gm11232-201ENSMUST00000084489 1680 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim35Q8C006 Zfp169-201ENSMUST00000110110 2196 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim35Q8C006 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Lrguk-201ENSMUST00000070189 3058 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Ddx39-206ENSMUST00000172396 3836 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Esr2-203ENSMUST00000110421 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.8□□□□□ -1
Trim35Q8C006 Dync1i2-203ENSMUST00000112136 2548 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Trim35Q8C006 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Il1r2-201ENSMUST00000027243 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim35Q8C006 Gm3286-201ENSMUST00000171752 1316 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
Trim35Q8C006 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Tpd52l2-201ENSMUST00000000844 2950 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Rims1-207ENSMUST00000164877 2294 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim35Q8C006 Gm11690-201ENSMUST00000128183 1856 ntTSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms