Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.15□□□□□ -1.43
Ccdc40Q8BI79 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Ccdc40Q8BI79 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Ccdc40Q8BI79 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC6.15□□□□□ -1.43
Ccdc40Q8BI79 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc40Q8BI79 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc40Q8BI79 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc40Q8BI79 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Ccdc40Q8BI79 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.15□□□□□ -1.43
Ccdc40Q8BI79 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm13998-201ENSMUST00000120952 335 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm11990-201ENSMUST00000121505 897 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm11879-201ENSMUST00000121885 702 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm26923-201ENSMUST00000182615 996 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm8009-201ENSMUST00000191672 436 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm31211-201ENSMUST00000199170 253 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm43233-201ENSMUST00000200491 616 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm18839-201ENSMUST00000204292 670 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm25099-201ENSMUST00000093716 116 ntBASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc40Q8BI79 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Snora35-201ENSMUST00000104579 128 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm16074-201ENSMUST00000119524 444 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm14876-201ENSMUST00000120795 327 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm28975-201ENSMUST00000186412 686 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm8282-201ENSMUST00000187559 483 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm43895-201ENSMUST00000203219 855 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm10688-201ENSMUST00000214985 520 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm23624-201ENSMUST00000082463 321 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Gm37456-201ENSMUST00000193176 5837 ntBASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Ccdc40Q8BI79 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms