Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm44539-201ENSMUST00000206010 238 ntBASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm2099-201ENSMUST00000220979 412 ntBASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm272-201ENSMUST00000222073 919 ntBASIC9.05□□□□□ -0.96
Col17a1Q07563 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm22220-201ENSMUST00000082671 149 ntBASIC9.05□□□□□ -0.96
Col17a1Q07563 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col17a1Q07563 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col17a1Q07563 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col17a1Q07563 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col17a1Q07563 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC9.05□□□□□ -0.96
Col17a1Q07563 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col17a1Q07563 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col17a1Q07563 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Gm11633-201ENSMUST00000118176 444 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 Gm15168-201ENSMUST00000121057 316 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 Gm12181-201ENSMUST00000121448 531 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Mir3620-201ENSMUST00000184710 61 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 Gm18863-201ENSMUST00000217004 1299 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 AC172027.1-201ENSMUST00000217659 337 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 AC165260.4-201ENSMUST00000225924 724 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 AC137961.1-201ENSMUST00000227924 734 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col17a1Q07563 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col17a1Q07563 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col17a1Q07563 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col17a1Q07563 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col17a1Q07563 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col17a1Q07563 Gm44441-201ENSMUST00000203642 2475 ntBASIC9.04□□□□□ -0.96
Col17a1Q07563 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC9.03□□□□□ -0.96
Col17a1Q07563 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm24429-201ENSMUST00000104076 132 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC9.03□□□□□ -0.96
Col17a1Q07563 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm28066-201ENSMUST00000188657 472 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm37866-201ENSMUST00000191950 696 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm42516-201ENSMUST00000198691 767 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm9057-201ENSMUST00000198791 296 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm6070-201ENSMUST00000207275 419 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC9.03□□□□□ -0.96
Col17a1Q07563 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm10705-201ENSMUST00000098980 461 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm37653-201ENSMUST00000195401 3578 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm42630-201ENSMUST00000195908 3448 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm45084-201ENSMUST00000207096 1957 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 AC151734.1-201ENSMUST00000227023 1740 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col17a1Q07563 AC126549.1-201ENSMUST00000225044 3687 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Gm44668-201ENSMUST00000207911 3265 ntBASIC9.03□□□□□ -0.96
Col17a1Q07563 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Col17a1Q07563 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.96
Col17a1Q07563 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm15096-201ENSMUST00000121918 878 ntBASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm22276-201ENSMUST00000122469 129 ntBASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm27896-201ENSMUST00000175162 317 ntBASIC9.02□□□□□ -0.96
Col17a1Q07563 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm38053-201ENSMUST00000193938 160 ntBASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm45226-201ENSMUST00000206602 288 ntBASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm20786-201ENSMUST00000212649 436 ntBASIC9.02□□□□□ -0.96
Col17a1Q07563 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Col17a1Q07563 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC9.02□□□□□ -0.96
Col17a1Q07563 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC9.02□□□□□ -0.96
Col17a1Q07563 CT025552.1-201ENSMUST00000224561 521 ntBASIC9.02□□□□□ -0.96
Col17a1Q07563 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm42892-201ENSMUST00000196227 3973 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms