Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm12844-201ENSMUST00000119463 582 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm12262-201ENSMUST00000119915 305 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm11581-201ENSMUST00000122024 763 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm19203-201ENSMUST00000174049 939 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm25675-201ENSMUST00000174979 118 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm7952-201ENSMUST00000180540 984 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm27659-201ENSMUST00000183472 98 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm28952-201ENSMUST00000189285 681 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm19777-201ENSMUST00000191940 358 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm3351-201ENSMUST00000193454 505 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Trbv9-201ENSMUST00000194494 290 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.76□□□□□ -1.49
Col8a1Q00780 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm34149-201ENSMUST00000203547 304 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm18410-201ENSMUST00000207199 577 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col8a1Q00780 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms