Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm6744-201ENSMUST00000119303 543 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm24236-201ENSMUST00000157794 134 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm26489-201ENSMUST00000157880 264 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm9006-201ENSMUST00000165520 841 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm18343-201ENSMUST00000172802 604 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm37681-201ENSMUST00000193880 727 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm43390-201ENSMUST00000196614 421 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm33601-201ENSMUST00000210001 961 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.08□□□□□ -1.6
Nkx3-1P97436 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Nkx3-1P97436 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx3-1P97436 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm22194-201ENSMUST00000116869 95 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm26595-201ENSMUST00000181585 484 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm37341-201ENSMUST00000194680 371 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm18705-201ENSMUST00000215985 913 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.07□□□□□ -1.6
Nkx3-1P97436 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nkx3-1P97436 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Naip3-201ENSMUST00000118082 4208 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms