Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CiitaP79621 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CiitaP79621 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CiitaP79621 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CiitaP79621 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CiitaP79621 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CiitaP79621 Gm15660-201ENSMUST00000118997 478 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm12482-201ENSMUST00000120435 630 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm14679-201ENSMUST00000121536 722 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm15335-201ENSMUST00000122442 411 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.39□□□□□ -1.39
CiitaP79621 Gm24731-201ENSMUST00000158227 131 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Gm27854-201ENSMUST00000175578 244 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm18183-201ENSMUST00000191024 615 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm38131-201ENSMUST00000192449 430 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm19739-201ENSMUST00000195941 153 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm7890-201ENSMUST00000204877 601 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm6702-201ENSMUST00000208496 471 ntBASIC6.39□□□□□ -1.39
CiitaP79621 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.39□□□□□ -1.39
CiitaP79621 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.39□□□□□ -1.39
CiitaP79621 Gm18601-201ENSMUST00000220831 634 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Gm6068-201ENSMUST00000222270 387 ntBASIC6.39□□□□□ -1.39
CiitaP79621 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CiitaP79621 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CiitaP79621 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CiitaP79621 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CiitaP79621 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CiitaP79621 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
CiitaP79621 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.39□□□□□ -1.39
CiitaP79621 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CiitaP79621 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CiitaP79621 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CiitaP79621 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CiitaP79621 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CiitaP79621 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CiitaP79621 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CiitaP79621 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CiitaP79621 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Gm12654-201ENSMUST00000120387 587 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.38□□□□□ -1.39
CiitaP79621 Gm14126-201ENSMUST00000122345 395 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Gm22959-201ENSMUST00000122514 303 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Mir3473a-201ENSMUST00000175011 78 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Gm27960-201ENSMUST00000183445 184 ntBASIC6.38□□□□□ -1.39
CiitaP79621 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.38□□□□□ -1.39
CiitaP79621 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
CiitaP79621 Gm18427-201ENSMUST00000195422 515 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.38□□□□□ -1.39
CiitaP79621 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CiitaP79621 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CiitaP79621 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CiitaP79621 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CiitaP79621 Gm23624-201ENSMUST00000082463 321 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.38□□□□□ -1.39
CiitaP79621 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.38□□□□□ -1.39
CiitaP79621 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.38□□□□□ -1.39
CiitaP79621 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CiitaP79621 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CiitaP79621 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CiitaP79621 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CiitaP79621 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CiitaP79621 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CiitaP79621 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.37□□□□□ -1.39
CiitaP79621 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms