Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm25550-201ENSMUST00000158079 128 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm18560-201ENSMUST00000173463 1123 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm20549-201ENSMUST00000174804 429 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm9285-201ENSMUST00000177691 697 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Mir6238-201ENSMUST00000184140 129 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.01□□□□□ -1.29
Hmgb1P63158 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm29072-201ENSMUST00000191149 678 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm37837-201ENSMUST00000191743 604 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm18407-201ENSMUST00000192126 790 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm37511-201ENSMUST00000192901 294 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm22897-201ENSMUST00000197860 128 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm43418-201ENSMUST00000201334 428 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm43459-201ENSMUST00000202093 331 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm5027-201ENSMUST00000206700 375 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm5045-201ENSMUST00000027054 810 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC7.01□□□□□ -1.29
Hmgb1P63158 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Hmgb1P63158 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm24144-201ENSMUST00000082632 111 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.01□□□□□ -1.29
Hmgb1P63158 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Hmgb1P63158 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Hmgb1P63158 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Hmgb1P63158 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Hmgb1P63158 AC102847.2-201ENSMUST00000227799 2906 ntBASIC7□□□□□ -1.29
Hmgb1P63158 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Hmgb1P63158 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
Hmgb1P63158 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Gm14356-201ENSMUST00000118322 869 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Hmgb1P63158 Gm11925-201ENSMUST00000121375 535 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm14353-201ENSMUST00000122200 869 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm23756-201ENSMUST00000157582 114 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm26037-201ENSMUST00000158150 311 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm6489-201ENSMUST00000178167 696 ntBASIC7□□□□□ -1.29
Hmgb1P63158 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Hmgb1P63158 Gm1972-201ENSMUST00000181606 964 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm8609-201ENSMUST00000182967 998 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC7□□□□□ -1.29
Hmgb1P63158 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC7□□□□□ -1.29
Hmgb1P63158 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC7□□□□□ -1.29
Hmgb1P63158 Gm38177-201ENSMUST00000192213 1040 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm37620-201ENSMUST00000192910 501 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Hmgb1P63158 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC7□□□□□ -1.29
Hmgb1P63158 Gm4548-201ENSMUST00000208487 509 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm18039-201ENSMUST00000217816 728 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm46364-201ENSMUST00000218548 319 ntBASIC7□□□□□ -1.29
Hmgb1P63158 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7□□□□□ -1.29
Hmgb1P63158 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7□□□□□ -1.29
Hmgb1P63158 Gm22444-201ENSMUST00000093693 108 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Fus-202ENSMUST00000079045 2623 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Hmgb1P63158 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm37183-201ENSMUST00000191712 3405 ntBASIC7□□□□□ -1.29
Hmgb1P63158 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7□□□□□ -1.29
Hmgb1P63158 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Hmgb1P63158 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC7□□□□□ -1.29
Hmgb1P63158 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Hmgb1P63158 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Hmgb1P63158 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Hmgb1P63158 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Hmgb1P63158 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.99□□□□□ -1.29
Hmgb1P63158 Gm7451-201ENSMUST00000208382 1392 ntBASIC6.99□□□□□ -1.29
Hmgb1P63158 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
Hmgb1P63158 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Hmgb1P63158 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Hmgb1P63158 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Hmgb1P63158 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Hmgb1P63158 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Hmgb1P63158 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.99□□□□□ -1.29
Hmgb1P63158 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Hmgb1P63158 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms