Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.64□□□□□ -1.51
Sox3P53784 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox3P53784 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.64□□□□□ -1.51
Sox3P53784 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.63□□□□□ -1.51
Sox3P53784 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sox3P53784 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox3P53784 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox3P53784 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Gm10936-201ENSMUST00000105264 252 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Gm13998-201ENSMUST00000120952 335 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Gm14515-201ENSMUST00000121327 216 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Gm11197-201ENSMUST00000145158 839 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox3P53784 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Gm22355-201ENSMUST00000175531 96 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Mir6417-201ENSMUST00000183815 116 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Gm27985-201ENSMUST00000185112 378 ntBASIC5.63□□□□□ -1.51
Sox3P53784 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox3P53784 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.63□□□□□ -1.51
Sox3P53784 Gm43946-201ENSMUST00000204058 886 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox3P53784 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Gm10095-201ENSMUST00000222765 483 ntBASIC5.63□□□□□ -1.51
Sox3P53784 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox3P53784 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox3P53784 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox3P53784 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox3P53784 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox3P53784 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Sox3P53784 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Sox3P53784 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Gm15901-201ENSMUST00000117663 941 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm4234-201ENSMUST00000119747 714 ntBASIC5.62□□□□□ -1.51
Sox3P53784 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Gm23224-201ENSMUST00000158122 271 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm3053-201ENSMUST00000161709 616 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Sox3P53784 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sox3P53784 Gm17121-201ENSMUST00000170414 847 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sox3P53784 Gm17222-201ENSMUST00000180135 847 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.62□□□□□ -1.51
Sox3P53784 Mir6992-201ENSMUST00000183342 109 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm37770-201ENSMUST00000192855 772 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Sox3P53784 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm43554-201ENSMUST00000199987 186 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm18850-201ENSMUST00000211578 388 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.62□□□□□ -1.51
Sox3P53784 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sox3P53784 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sox3P53784 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sox3P53784 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.62□□□□□ -1.51
Sox3P53784 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms