Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.42□□□□□ -1.54
Sox6P40645 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.42□□□□□ -1.54
Sox6P40645 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.42□□□□□ -1.54
Sox6P40645 Gm23386-201ENSMUST00000158585 144 ntBASIC5.42□□□□□ -1.54
Sox6P40645 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.42□□□□□ -1.54
Sox6P40645 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gm8367-201ENSMUST00000186145 887 ntBASIC5.42□□□□□ -1.54
Sox6P40645 Gm28080-201ENSMUST00000188552 722 ntBASIC5.42□□□□□ -1.54
Sox6P40645 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gm21524-201ENSMUST00000190499 696 ntBASIC5.42□□□□□ -1.54
Sox6P40645 Gm21715-201ENSMUST00000191056 694 ntBASIC5.42□□□□□ -1.54
Sox6P40645 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.42□□□□□ -1.54
Sox6P40645 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gm44316-201ENSMUST00000199274 97 ntBASIC5.42□□□□□ -1.54
Sox6P40645 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.42□□□□□ -1.54
Sox6P40645 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Sox6P40645 Gm5886-202ENSMUST00000203957 522 ntBASIC5.42□□□□□ -1.54
Sox6P40645 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.42□□□□□ -1.54
Sox6P40645 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.42□□□□□ -1.54
Sox6P40645 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sox6P40645 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.42□□□□□ -1.54
Sox6P40645 AV026068-216ENSMUST00000223874 328 ntBASIC5.42□□□□□ -1.54
Sox6P40645 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.42□□□□□ -1.54
Sox6P40645 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gm23686-201ENSMUST00000083241 164 ntBASIC5.42□□□□□ -1.54
Sox6P40645 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Sox6P40645 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.42□□□□□ -1.54
Sox6P40645 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.42□□□□□ -1.54
Sox6P40645 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Sox6P40645 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Sox6P40645 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sox6P40645 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox6P40645 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Sox6P40645 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Sox6P40645 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.41□□□□□ -1.54
Sox6P40645 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Sox6P40645 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Sox6P40645 Gm22371-201ENSMUST00000104588 130 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm16074-201ENSMUST00000119524 444 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm26410-201ENSMUST00000157670 261 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm10177-201ENSMUST00000160052 444 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm17223-201ENSMUST00000171413 481 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Sox6P40645 Gm22852-201ENSMUST00000177899 101 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm8183-201ENSMUST00000183134 980 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.41□□□□□ -1.54
Sox6P40645 Gm2367-201ENSMUST00000192374 472 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.41□□□□□ -1.54
Sox6P40645 Gm412-201ENSMUST00000193360 948 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.41□□□□□ -1.54
Sox6P40645 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm4083-201ENSMUST00000207158 451 ntBASIC5.41□□□□□ -1.54
Sox6P40645 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.41□□□□□ -1.54
Sox6P40645 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.41□□□□□ -1.54
Sox6P40645 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Gm8256-203ENSMUST00000228692 591 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sox6P40645 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.41□□□□□ -1.54
Sox6P40645 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Sox6P40645 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.41□□□□□ -1.54
Sox6P40645 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sox6P40645 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox6P40645 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.41□□□□□ -1.54
Sox6P40645 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Sox6P40645 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox6P40645 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Sox6P40645 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Sox6P40645 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sox6P40645 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms