Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col2a1P28481 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC6.52□□□□□ -1.37
Col2a1P28481 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.52□□□□□ -1.37
Col2a1P28481 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC6.51□□□□□ -1.37
Col2a1P28481 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col2a1P28481 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col2a1P28481 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm23750-201ENSMUST00000104222 132 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm24940-201ENSMUST00000158326 108 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.51□□□□□ -1.37
Col2a1P28481 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Col2a1P28481 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm17952-201ENSMUST00000193914 747 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm44580-201ENSMUST00000206333 877 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.51□□□□□ -1.37
Col2a1P28481 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.51□□□□□ -1.37
Col2a1P28481 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col2a1P28481 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.51□□□□□ -1.37
Col2a1P28481 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.51□□□□□ -1.37
Col2a1P28481 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.51□□□□□ -1.37
Col2a1P28481 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col2a1P28481 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col2a1P28481 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col2a1P28481 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col2a1P28481 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.51□□□□□ -1.37
Col2a1P28481 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col2a1P28481 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col2a1P28481 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.5□□□□□ -1.37
Col2a1P28481 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.5□□□□□ -1.37
Col2a1P28481 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Col2a1P28481 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col2a1P28481 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Gm14601-201ENSMUST00000120892 236 ntBASIC6.5□□□□□ -1.37
Col2a1P28481 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.5□□□□□ -1.37
Col2a1P28481 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col2a1P28481 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col2a1P28481 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col2a1P28481 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.5□□□□□ -1.37
Col2a1P28481 Gm37215-201ENSMUST00000194927 1259 ntBASIC6.5□□□□□ -1.37
Col2a1P28481 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Gm19880-201ENSMUST00000207731 318 ntBASIC6.5□□□□□ -1.37
Col2a1P28481 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col2a1P28481 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.5□□□□□ -1.37
Col2a1P28481 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Col2a1P28481 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col2a1P28481 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Col2a1P28481 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.49□□□□□ -1.37
Col2a1P28481 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Col2a1P28481 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm25758-201ENSMUST00000103987 129 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm14620-201ENSMUST00000120656 383 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Gm15152-201ENSMUST00000121540 394 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Gm23883-201ENSMUST00000122686 290 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Gm25291-201ENSMUST00000122795 144 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm27754-201ENSMUST00000183340 126 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms