Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sdc1P18828 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Sdc1P18828 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC4.63□□□□□ -1.67
Sdc1P18828 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm12641-201ENSMUST00000117874 985 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm14957-201ENSMUST00000121069 817 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm6027-201ENSMUST00000121467 756 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm12732-201ENSMUST00000121688 180 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm12175-201ENSMUST00000122081 345 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC4.63□□□□□ -1.67
Sdc1P18828 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm25244-201ENSMUST00000178089 132 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Mir6412-201ENSMUST00000184477 97 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm28507-201ENSMUST00000189737 703 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm43576-201ENSMUST00000197937 871 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm8190-201ENSMUST00000199603 586 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm6520-201ENSMUST00000200636 410 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC4.63□□□□□ -1.67
Sdc1P18828 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm8863-201ENSMUST00000216630 926 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm18040-201ENSMUST00000217922 827 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm18503-201ENSMUST00000220340 728 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 AC126685.1-201ENSMUST00000221001 121 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 CT009711.2-202ENSMUST00000224538 973 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm5087-204ENSMUST00000225820 645 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 AC154323.1-201ENSMUST00000228329 1231 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Sdc1P18828 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Sdc1P18828 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Sdc1P18828 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Sdc1P18828 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Sdc1P18828 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Sdc1P18828 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Gm15789-201ENSMUST00000118992 1359 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm37482-201ENSMUST00000194899 2791 ntBASIC4.63□□□□□ -1.67
Sdc1P18828 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC4.63□□□□□ -1.67
Sdc1P18828 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sdc1P18828 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sdc1P18828 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.62□□□□□ -1.67
Sdc1P18828 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sdc1P18828 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms