Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Gm22370-201ENSMUST00000102422 83 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm24069-201ENSMUST00000104512 127 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm11821-201ENSMUST00000117335 979 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm15181-201ENSMUST00000120142 177 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.89□□□□□ -1.47
Lire1P11260 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.89□□□□□ -1.47
Lire1P11260 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Gm25374-201ENSMUST00000158158 101 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm22530-201ENSMUST00000158820 118 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm29197-201ENSMUST00000185922 702 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm28974-201ENSMUST00000187893 231 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Gm29552-201ENSMUST00000190548 660 ntBASIC5.89□□□□□ -1.47
Lire1P11260 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Gm43689-201ENSMUST00000195951 427 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm4083-201ENSMUST00000207158 451 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.89□□□□□ -1.47
Lire1P11260 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.89□□□□□ -1.47
Lire1P11260 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Gm19340-201ENSMUST00000221995 345 ntBASIC5.89□□□□□ -1.47
Lire1P11260 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.89□□□□□ -1.47
Lire1P11260 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.89□□□□□ -1.47
Lire1P11260 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.89□□□□□ -1.47
Lire1P11260 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Gm43029-201ENSMUST00000201829 1535 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lire1P11260 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.89□□□□□ -1.47
Lire1P11260 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Lire1P11260 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.89□□□□□ -1.47
Lire1P11260 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lire1P11260 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.88□□□□□ -1.47
Lire1P11260 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Thap6-201ENSMUST00000191860 3151 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lire1P11260 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Lire1P11260 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Lire1P11260 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lire1P11260 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Lire1P11260 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Lire1P11260 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Lire1P11260 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Gm8250-201ENSMUST00000117398 774 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Gm14925-201ENSMUST00000120611 438 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Gm25387-201ENSMUST00000157813 132 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Gm26355-201ENSMUST00000158220 105 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Gm22158-201ENSMUST00000158411 126 ntBASIC5.88□□□□□ -1.47
Lire1P11260 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Gm21803-201ENSMUST00000188897 693 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Gm37837-201ENSMUST00000191743 604 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Gm37614-201ENSMUST00000195645 210 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Gm43116-201ENSMUST00000199789 195 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.88□□□□□ -1.47
Lire1P11260 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC5.88□□□□□ -1.47
Lire1P11260 Gm5055-201ENSMUST00000215697 581 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Gm46364-201ENSMUST00000218548 319 ntBASIC5.88□□□□□ -1.47
Lire1P11260 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.88□□□□□ -1.47
Lire1P11260 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC5.88□□□□□ -1.47
Lire1P11260 Gm18940-201ENSMUST00000222518 871 ntBASIC5.88□□□□□ -1.47
Lire1P11260 AC168062.1-201ENSMUST00000228048 769 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Gm6436-201ENSMUST00000077163 451 ntBASIC5.88□□□□□ -1.47
Lire1P11260 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.88□□□□□ -1.47
Lire1P11260 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lire1P11260 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Lire1P11260 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lire1P11260 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms