Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Mirt2-201ENSMUST00000175179 285 ntBASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm37196-201ENSMUST00000194762 906 ntBASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm45734-201ENSMUST00000211916 411 ntBASIC6.26□□□□□ -1.41
Chmp6P0C0A3 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.26□□□□□ -1.41
Chmp6P0C0A3 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm18413-201ENSMUST00000221573 655 ntBASIC6.26□□□□□ -1.41
Chmp6P0C0A3 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm11105-201ENSMUST00000112781 478 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm15331-201ENSMUST00000120225 385 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm11990-201ENSMUST00000121505 897 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm15335-201ENSMUST00000122442 411 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm21772-201ENSMUST00000169213 478 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm17126-201ENSMUST00000172276 523 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm7745-201ENSMUST00000182235 973 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm34768-201ENSMUST00000193884 565 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Chmp6P0C0A3 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm13991-201ENSMUST00000120190 648 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm8545-201ENSMUST00000120692 801 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm22492-201ENSMUST00000157192 297 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm27006-201ENSMUST00000182218 943 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm27037-201ENSMUST00000182270 960 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm44463-201ENSMUST00000198895 137 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms