Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm37310-201ENSMUST00000195237 2968 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm14688-201ENSMUST00000119169 303 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm3084-201ENSMUST00000169967 598 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Mir199b-201ENSMUST00000175066 110 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm25096-201ENSMUST00000104043 129 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm12285-201ENSMUST00000117347 233 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm22177-201ENSMUST00000175002 158 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm19096-201ENSMUST00000209705 766 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm10744-201ENSMUST00000220184 2706 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm15263-201ENSMUST00000121556 642 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm23865-201ENSMUST00000157723 97 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm45422-201ENSMUST00000211476 246 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm24763-201ENSMUST00000083688 190 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a3E9PWQ3 Gm42568-201ENSMUST00000195639 1841 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm25420-201ENSMUST00000104216 127 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm8599-201ENSMUST00000193033 457 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm44038-201ENSMUST00000203952 889 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm45001-201ENSMUST00000208279 2515 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 AC166574.1-201ENSMUST00000226916 1309 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm26357-201ENSMUST00000158218 115 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm3170-201ENSMUST00000168753 850 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm3348-201ENSMUST00000177813 850 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm43580-201ENSMUST00000202892 284 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 AC153961.1-201ENSMUST00000217760 385 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm11360-201ENSMUST00000221898 262 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Kif1b-202ENSMUST00000055647 5992 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 Gm3091-201ENSMUST00000163408 484 ntBASIC5.5□□□□□ -1.53
Col6a3E9PWQ3 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms