Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 CU062626.1-201ENSMUST00000225248 505 ntBASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Gm23927-201ENSMUST00000082466 215 ntBASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Gm6419-201ENSMUST00000097166 429 ntBASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Gm38277-201ENSMUST00000195172 1367 ntBASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Gm5512-201ENSMUST00000218013 1353 ntBASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Gm37140-201ENSMUST00000192914 1684 ntBASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Gm12887B1AVM1 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm37332-201ENSMUST00000195853 2844 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 AC120347.1-201ENSMUST00000223326 1639 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm12077-201ENSMUST00000117049 364 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm11761-201ENSMUST00000121392 445 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm25291-201ENSMUST00000122795 144 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm23806-201ENSMUST00000175157 109 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm22420-201ENSMUST00000178795 126 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Ighv5-3-201ENSMUST00000195336 322 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm18839-201ENSMUST00000204292 670 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm45405-201ENSMUST00000211544 609 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm20786-201ENSMUST00000212649 436 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 AC073562.1-201ENSMUST00000222117 401 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 AC137902.1-201ENSMUST00000228184 102 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm26442-201ENSMUST00000082588 153 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Mir138-2-201ENSMUST00000083578 71 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm44530-201ENSMUST00000207920 3559 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm14886-201ENSMUST00000117208 2629 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.47□□□□□ -1.69
Gm12887B1AVM1 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
Gm12887B1AVM1 AC132465.1-201ENSMUST00000219938 1307 ntBASIC4.46□□□□□ -1.69
Gm12887B1AVM1 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.69
Gm12887B1AVM1 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.46□□□□□ -1.69
Gm12887B1AVM1 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Gm43745-201ENSMUST00000198085 1883 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Gm25916-201ENSMUST00000104263 131 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Gm14985-201ENSMUST00000118693 786 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Gm15660-201ENSMUST00000118997 478 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Gm12262-201ENSMUST00000119915 305 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Gm7571-201ENSMUST00000120252 927 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Gm15152-201ENSMUST00000121540 394 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Rps29-ps-201ENSMUST00000122083 172 ntBASIC4.46□□□□□ -1.7
Gm12887B1AVM1 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms