Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm7146-201ENSMUST00000116079 739 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm14712-201ENSMUST00000120195 772 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm15237-201ENSMUST00000122104 469 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm14349-201ENSMUST00000137155 902 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm4845-201ENSMUST00000179202 562 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm28885-201ENSMUST00000185615 563 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm24041-201ENSMUST00000083115 156 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm25515-201ENSMUST00000083858 157 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Mir700-201ENSMUST00000102169 79 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm16164-201ENSMUST00000160078 468 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm26238-201ENSMUST00000175538 117 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm44091-201ENSMUST00000205212 649 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm25133-201ENSMUST00000082647 130 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm22126-201ENSMUST00000083244 142 ntBASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim3Q9R1R2 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm14529-201ENSMUST00000117894 406 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm7927-201ENSMUST00000118818 880 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Gm12308-201ENSMUST00000120440 389 ntBASIC5.51□□□□□ -1.53
Trim3Q9R1R2 Snora47-201ENSMUST00000157483 138 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms