Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm24373-201ENSMUST00000104393 132 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Mir467h-201ENSMUST00000116759 121 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm16221-201ENSMUST00000117331 393 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm11810-201ENSMUST00000118311 333 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm11833-201ENSMUST00000118393 853 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm14016-201ENSMUST00000119095 486 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm11252-201ENSMUST00000120572 939 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm14574-201ENSMUST00000120644 279 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm12593-201ENSMUST00000120981 743 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm25770-201ENSMUST00000158566 115 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm25164-201ENSMUST00000158908 116 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm5839-201ENSMUST00000182835 1007 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm27542-201ENSMUST00000184184 256 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm21181-201ENSMUST00000186249 330 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm28149-201ENSMUST00000187102 378 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm28768-201ENSMUST00000189034 378 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm37193-201ENSMUST00000193087 513 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm43368-201ENSMUST00000200638 409 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm44254-201ENSMUST00000204184 322 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm45316-201ENSMUST00000210128 162 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 CT025680.1-201ENSMUST00000217375 375 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 AC131720.2-201ENSMUST00000220420 431 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm9289-201ENSMUST00000221269 606 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm7045-201ENSMUST00000221466 605 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm19154-201ENSMUST00000223330 940 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 AC137871.2-201ENSMUST00000226482 289 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.73□□□□□ -1.33
Trim39Q9ESN2 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Gm25876-201ENSMUST00000104329 119 ntBASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Gm15060-201ENSMUST00000119550 948 ntBASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Gm8757-201ENSMUST00000119660 372 ntBASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Gm23435-201ENSMUST00000157183 156 ntBASIC6.72□□□□□ -1.33
Trim39Q9ESN2 Gm22311-201ENSMUST00000158006 110 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms