Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm6757-201ENSMUST00000189810 1706 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm12641-201ENSMUST00000117874 985 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm14852-201ENSMUST00000120065 647 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm15899-201ENSMUST00000128586 238 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm26357-201ENSMUST00000158218 115 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm7867-201ENSMUST00000189856 546 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm8861-201ENSMUST00000196346 832 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm5288-201ENSMUST00000198323 1119 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm17918-201ENSMUST00000205315 574 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm20734-201ENSMUST00000216939 193 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm18729-201ENSMUST00000217230 621 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 AC131720.2-201ENSMUST00000220420 431 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm24036-201ENSMUST00000082868 156 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ube3bQ9ES34 Gm37569-201ENSMUST00000192111 1722 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm13141-201ENSMUST00000117417 456 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm13627-201ENSMUST00000119700 706 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm11198-201ENSMUST00000119771 974 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm11363-201ENSMUST00000121672 548 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm13237-201ENSMUST00000122151 635 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm15367-201ENSMUST00000122398 1016 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm17217-201ENSMUST00000166613 469 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm5116-201ENSMUST00000187732 463 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm29627-201ENSMUST00000187984 463 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm28843-201ENSMUST00000189198 678 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm29546-201ENSMUST00000191171 678 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm17893-201ENSMUST00000203017 770 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm8479-201ENSMUST00000203825 718 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm18215-201ENSMUST00000204429 798 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm7624-201ENSMUST00000209702 435 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Gm7570-201ENSMUST00000215246 698 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 AC131745.1-201ENSMUST00000223660 330 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ube3bQ9ES34 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms