Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm14563-201ENSMUST00000120571 354 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm12890-201ENSMUST00000120885 373 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm24477-201ENSMUST00000157438 103 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm21542-201ENSMUST00000182307 993 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Mir6992-201ENSMUST00000183342 109 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm29663-201ENSMUST00000186962 853 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm37719-201ENSMUST00000194615 292 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm44539-201ENSMUST00000206010 238 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm19182-201ENSMUST00000207139 577 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm13114-201ENSMUST00000117605 106 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm14659-201ENSMUST00000117667 843 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm12850-201ENSMUST00000119210 436 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm12189-201ENSMUST00000119779 912 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm11369-201ENSMUST00000120812 318 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm13578-201ENSMUST00000120849 590 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm8317-201ENSMUST00000121261 471 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm15618-201ENSMUST00000121610 452 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm25013-201ENSMUST00000158402 128 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm8582-201ENSMUST00000164061 789 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm25065-201ENSMUST00000177914 132 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm17048-201ENSMUST00000179266 847 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm25891-201ENSMUST00000180050 132 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm4832-201ENSMUST00000182679 399 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm28586-201ENSMUST00000189857 456 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm43222-201ENSMUST00000199013 603 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm44316-201ENSMUST00000199274 97 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm7181-201ENSMUST00000202197 434 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm44251-201ENSMUST00000204963 442 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm32526-201ENSMUST00000221878 981 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lima1Q9ERG0 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms