Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Gm12308-201ENSMUST00000120440 389 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm15224-201ENSMUST00000120501 388 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm25782-201ENSMUST00000122526 289 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm24545-201ENSMUST00000158651 85 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm16138-201ENSMUST00000159341 821 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Mir3058-201ENSMUST00000175126 91 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm29668-201ENSMUST00000187802 315 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm37265-201ENSMUST00000191698 885 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm5050-201ENSMUST00000197164 775 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm18689-201ENSMUST00000203969 902 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm44580-201ENSMUST00000206333 877 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 AC153864.1-201ENSMUST00000218482 523 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Zfp429-203ENSMUST00000224684 524 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 AC115304.1-202ENSMUST00000226850 837 ntBASIC4.84□□□□□ -1.63
Pfdn1Q9CWM4 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Pfdn1Q9CWM4 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Pfdn1Q9CWM4 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Pfdn1Q9CWM4 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Pfdn1Q9CWM4 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Pfdn1Q9CWM4 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Pfdn1Q9CWM4 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm8750-201ENSMUST00000173278 1537 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm6327-201ENSMUST00000171185 1335 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm11270-201ENSMUST00000117685 471 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm9697-201ENSMUST00000147052 997 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm9359-201ENSMUST00000163721 1221 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm24081-201ENSMUST00000175177 125 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm23018-201ENSMUST00000177928 109 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm6098-201ENSMUST00000180234 330 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm28573-201ENSMUST00000187821 380 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm9443-201ENSMUST00000188406 816 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm28400-201ENSMUST00000191332 380 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm2147-201ENSMUST00000193588 639 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm37774-201ENSMUST00000194401 245 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm6520-201ENSMUST00000200636 410 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 CT571271.1-201ENSMUST00000227071 670 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm42685-201ENSMUST00000200378 2390 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Pfdn1Q9CWM4 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm22256-201ENSMUST00000102291 107 ntBASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm13770-201ENSMUST00000117149 305 ntBASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm13455-201ENSMUST00000118767 517 ntBASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm14034-201ENSMUST00000120147 551 ntBASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm14331-201ENSMUST00000120396 409 ntBASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm11553-201ENSMUST00000120682 240 ntBASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm15349-201ENSMUST00000121154 204 ntBASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Pfdn1Q9CWM4 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 151.5 ms