Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm43798-201ENSMUST00000202056 394 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Mir449c-201ENSMUST00000102192 109 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm24069-201ENSMUST00000104512 127 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm13641-201ENSMUST00000117993 473 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm14679-201ENSMUST00000121536 722 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm16297-201ENSMUST00000161466 459 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm21399-201ENSMUST00000180210 597 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm4832-201ENSMUST00000182679 399 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm35013-201ENSMUST00000197218 832 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm29781-201ENSMUST00000203862 478 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm8523-201ENSMUST00000211386 552 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Olfr192-201ENSMUST00000080251 925 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.44□□□□□ -1.54
Use1Q9CQ56 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Use1Q9CQ56 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.43□□□□□ -1.54
Use1Q9CQ56 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Use1Q9CQ56 BC055308-201ENSMUST00000193380 2538 ntBASIC5.43□□□□□ -1.54
Use1Q9CQ56 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Use1Q9CQ56 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.43□□□□□ -1.54
Use1Q9CQ56 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.43□□□□□ -1.54
Use1Q9CQ56 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Gm24272-201ENSMUST00000102329 98 ntBASIC5.43□□□□□ -1.54
Use1Q9CQ56 Gm25345-201ENSMUST00000104505 133 ntBASIC5.43□□□□□ -1.54
Use1Q9CQ56 Snora35-201ENSMUST00000104579 128 ntBASIC5.43□□□□□ -1.54
Use1Q9CQ56 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Zfp389-201ENSMUST00000118425 675 ntBASIC5.43□□□□□ -1.54
Use1Q9CQ56 Gm8722-201ENSMUST00000121466 769 ntBASIC5.43□□□□□ -1.54
Use1Q9CQ56 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Use1Q9CQ56 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms