Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm24781-201ENSMUST00000157636 117 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm7418-201ENSMUST00000162120 801 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm3585-201ENSMUST00000173438 875 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm29545-201ENSMUST00000188878 694 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm2077-201ENSMUST00000195017 319 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm43476-201ENSMUST00000197873 405 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm18877-201ENSMUST00000207706 539 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm45725-201ENSMUST00000212962 337 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm7252-201ENSMUST00000223284 456 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 CT030194.2-201ENSMUST00000225752 379 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 CT025525.3-201ENSMUST00000228858 366 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.61□□□□□ -1.19
Trim11Q99PQ2 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm43577-201ENSMUST00000197090 3344 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm14870-201ENSMUST00000118414 156 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm6373-201ENSMUST00000121026 360 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm24442-201ENSMUST00000157238 327 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm24002-201ENSMUST00000158456 104 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm37884-201ENSMUST00000191857 818 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm37550-201ENSMUST00000193230 463 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm5711-201ENSMUST00000197896 421 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm19764-201ENSMUST00000203630 649 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm17822-201ENSMUST00000204307 351 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm19232-201ENSMUST00000211621 652 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm18388-201ENSMUST00000222339 557 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm25582-201ENSMUST00000083412 110 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim11Q99PQ2 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms