Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Pcdha9Q91Y11 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm11833-201ENSMUST00000118393 853 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm25013-201ENSMUST00000158402 128 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm25065-201ENSMUST00000177914 132 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm25891-201ENSMUST00000180050 132 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm8183-201ENSMUST00000183134 980 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Mir6992-201ENSMUST00000183342 109 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm44382-201ENSMUST00000198683 122 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 AV026068-216ENSMUST00000223874 328 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdha9Q91Y11 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm22371-201ENSMUST00000104588 130 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Klra14-ps-201ENSMUST00000119532 802 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm14554-201ENSMUST00000119548 661 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm25117-201ENSMUST00000157194 144 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm17137-202ENSMUST00000165729 957 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm17366-201ENSMUST00000167629 187 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm27512-201ENSMUST00000175328 126 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm15257-201ENSMUST00000177680 883 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm15252-201ENSMUST00000177750 883 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm15260-201ENSMUST00000179402 883 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm18407-201ENSMUST00000192126 790 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm37358-201ENSMUST00000195492 479 ntBASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdha9Q91Y11 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 152.3 ms