Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm26321-201ENSMUST00000157740 242 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm24300-201ENSMUST00000177809 109 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm24017-201ENSMUST00000178726 109 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm23952-201ENSMUST00000179380 109 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm27185-201ENSMUST00000184296 247 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm29383-201ENSMUST00000188284 480 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm43089-201ENSMUST00000199162 275 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm43561-201ENSMUST00000199866 448 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm4585-201ENSMUST00000207218 452 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm44683-201ENSMUST00000209088 484 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm19540-201ENSMUST00000221843 810 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm7252-201ENSMUST00000223284 456 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm4011-201ENSMUST00000174657 2555 ntBASIC7.04□□□□□ -1.28
Ccdc9Q8VC31 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Mir546-201ENSMUST00000102105 121 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm24869-201ENSMUST00000104072 128 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm12245-201ENSMUST00000117266 357 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm12442-201ENSMUST00000118372 338 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm12752-201ENSMUST00000121657 811 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm23632-201ENSMUST00000175289 125 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm22420-201ENSMUST00000178795 126 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm43015-201ENSMUST00000199087 565 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm6681-201ENSMUST00000205215 607 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm37101-201ENSMUST00000191656 3660 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Gm42841-201ENSMUST00000199806 1932 ntBASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Ccdc9Q8VC31 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
Ccdc9Q8VC31 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Gm37959-201ENSMUST00000191700 2897 ntBASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Gm25396-201ENSMUST00000103981 133 ntBASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Gm8424-201ENSMUST00000117716 988 ntBASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Gm11501-201ENSMUST00000118039 581 ntBASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Gm7312-201ENSMUST00000118798 469 ntBASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Gm11902-201ENSMUST00000118849 270 ntBASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC7.02□□□□□ -1.29
Ccdc9Q8VC31 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms