Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm24434-201ENSMUST00000104081 132 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm22714-201ENSMUST00000116894 78 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm15332-201ENSMUST00000118386 357 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm6744-201ENSMUST00000119303 543 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm14331-201ENSMUST00000120396 409 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm11369-201ENSMUST00000120812 318 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm23995-201ENSMUST00000158060 129 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm24081-201ENSMUST00000175177 125 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm27210-201ENSMUST00000184263 402 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm37716-201ENSMUST00000193553 947 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm37463-201ENSMUST00000193819 796 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm45485-201ENSMUST00000211229 357 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm24200-201ENSMUST00000082955 157 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm24454-201ENSMUST00000083349 132 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.71□□□□□ -1.5
Lrif1Q8CDD9 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm11902-201ENSMUST00000118849 270 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm12396-201ENSMUST00000121600 306 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm24477-201ENSMUST00000157438 103 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm20480-201ENSMUST00000173953 250 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm2367-201ENSMUST00000192374 472 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm6631-201ENSMUST00000193699 559 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm44582-201ENSMUST00000209125 445 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Olfr519-201ENSMUST00000084752 960 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lrif1Q8CDD9 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms