Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm44869-201ENSMUST00000208836 357 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm45473-201ENSMUST00000211452 616 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm8290-201ENSMUST00000218202 477 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm45172-201ENSMUST00000206054 1301 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm15182-201ENSMUST00000120832 1676 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm15078-201ENSMUST00000118371 782 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm12401-201ENSMUST00000118435 228 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm6884-201ENSMUST00000119318 615 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm13818-201ENSMUST00000119441 511 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm15719-201ENSMUST00000120619 635 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm15187-201ENSMUST00000122329 264 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm23553-201ENSMUST00000157817 295 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm4207-201ENSMUST00000173144 960 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm27219-201ENSMUST00000184633 742 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm37187-201ENSMUST00000193425 341 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm37375-201ENSMUST00000193859 387 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm37385-201ENSMUST00000195223 387 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 AC157822.1-201ENSMUST00000196643 80 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm42619-201ENSMUST00000197564 1136 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm8929-201ENSMUST00000197781 1132 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm42886-201ENSMUST00000199214 466 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm43798-201ENSMUST00000202056 394 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm45026-201ENSMUST00000205292 833 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm45525-201ENSMUST00000210800 389 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC7□□□□□ -1.29
Vps53Q8CCB4 AC133650.1-201ENSMUST00000217243 578 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm9237-201ENSMUST00000221499 548 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 AC161586.1-201ENSMUST00000223232 547 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 AC122459.2-201ENSMUST00000227099 638 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 AC133283.1-201ENSMUST00000228443 859 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm22300-201ENSMUST00000082661 126 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm42513-201ENSMUST00000197831 2119 ntBASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Vps53Q8CCB4 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC7□□□□□ -1.29
Vps53Q8CCB4 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Gm20486-201ENSMUST00000101544 128 ntBASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Gm22372-201ENSMUST00000104589 136 ntBASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Vps53Q8CCB4 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms