Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm3148-201ENSMUST00000203594 612 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm18215-201ENSMUST00000204429 798 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm44048-201ENSMUST00000204531 361 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm8523-201ENSMUST00000211386 552 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm10743-201ENSMUST00000219611 2358 ntBASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm25430-201ENSMUST00000157614 289 ntBASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm4874-201ENSMUST00000203589 691 ntBASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm40692-201ENSMUST00000220411 491 ntBASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.19□□□□□ -1.58
Col6a6Q8C6K9 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm37341-201ENSMUST00000194680 371 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm9238-201ENSMUST00000196181 329 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm29755-201ENSMUST00000196976 948 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm45525-201ENSMUST00000210800 389 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm45608-201ENSMUST00000210948 389 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm25187-201ENSMUST00000083906 133 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm24429-201ENSMUST00000104076 132 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm16089-201ENSMUST00000117679 336 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm7927-201ENSMUST00000118818 880 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm15741-201ENSMUST00000119401 754 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm29124-201ENSMUST00000186576 452 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 125.8 ms