Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm27679-201ENSMUST00000184612 84 ntBASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Gm21139-201ENSMUST00000186594 877 ntBASIC5.96□□□□□ -1.46
Nup54Q8BTS4 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Gm4742-201ENSMUST00000200261 771 ntBASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Gm5735-201ENSMUST00000207053 167 ntBASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup54Q8BTS4 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.96□□□□□ -1.46
Nup54Q8BTS4 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.96□□□□□ -1.46
Nup54Q8BTS4 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.96□□□□□ -1.46
Nup54Q8BTS4 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup54Q8BTS4 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nup54Q8BTS4 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm14106-201ENSMUST00000119382 438 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm9006-201ENSMUST00000165520 841 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm23450-201ENSMUST00000178285 91 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm27193-201ENSMUST00000184217 586 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm37024-201ENSMUST00000192224 868 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm37235-201ENSMUST00000195171 59 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Mir412-201ENSMUST00000083636 80 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup54Q8BTS4 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm15786-201ENSMUST00000121079 450 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm22959-201ENSMUST00000122514 303 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm25227-201ENSMUST00000158204 112 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm8185-201ENSMUST00000160999 669 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm18343-201ENSMUST00000172802 604 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm22650-201ENSMUST00000175138 105 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm27024-201ENSMUST00000182561 755 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm28640-201ENSMUST00000190918 550 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm45156-201ENSMUST00000207255 439 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm31166-201ENSMUST00000209326 288 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm20786-201ENSMUST00000212649 436 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Gm18601-201ENSMUST00000220831 634 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Nup54Q8BTS4 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms