Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm37936-201ENSMUST00000194647 1322 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Mir190b-201ENSMUST00000104803 80 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm9672-201ENSMUST00000166437 425 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm2619-202ENSMUST00000166777 651 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm27018-201ENSMUST00000181136 225 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm29389-201ENSMUST00000191562 352 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm18971-201ENSMUST00000197240 374 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm43384-201ENSMUST00000200569 637 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm8999-201ENSMUST00000204951 969 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm7368-201ENSMUST00000213307 367 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm19181-201ENSMUST00000218891 940 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 AC116656.1-201ENSMUST00000227040 755 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Olfr197-201ENSMUST00000080031 926 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm7739-201ENSMUST00000221131 1560 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh19Q80TF3 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm38104-201ENSMUST00000195121 1895 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm11859-201ENSMUST00000118099 455 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm5601-201ENSMUST00000118909 972 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm23981-201ENSMUST00000157136 106 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm26402-201ENSMUST00000158499 113 ntBASIC6.84□□□□□ -1.31
Pcdh19Q80TF3 Gm3091-201ENSMUST00000163408 484 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms