Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm37254-201ENSMUST00000193542 3901 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm38118-201ENSMUST00000192052 2222 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm13435-201ENSMUST00000120111 1023 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm12094-201ENSMUST00000121781 472 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm25430-201ENSMUST00000157614 289 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm25605-201ENSMUST00000158364 124 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 S100a11-ps-201ENSMUST00000181735 306 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm27754-201ENSMUST00000183340 126 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm43018-201ENSMUST00000198075 1275 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm8291-201ENSMUST00000209635 1261 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 AC152169.2-201ENSMUST00000224558 613 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 AC154484.2-201ENSMUST00000228359 818 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Mir129-1-201ENSMUST00000083535 73 ntBASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarca2Q6DIC0 Gm42630-201ENSMUST00000195908 3448 ntBASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Gm25176-201ENSMUST00000122640 125 ntBASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 AC129219.1-201ENSMUST00000224336 448 ntBASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Gm22741-201ENSMUST00000083438 165 ntBASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarca2Q6DIC0 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Gm37364-201ENSMUST00000192533 3920 ntBASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Gm24429-201ENSMUST00000104076 132 ntBASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 AC174780.1-201ENSMUST00000199415 1107 ntBASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Gm7688-201ENSMUST00000212857 337 ntBASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 AC152979.3-201ENSMUST00000217720 479 ntBASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Gm24706-201ENSMUST00000082806 137 ntBASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Gm44440-201ENSMUST00000203139 2373 ntBASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarca2Q6DIC0 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarca2Q6DIC0 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Smarca2Q6DIC0 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
Smarca2Q6DIC0 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarca2Q6DIC0 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 AC132852.2-201ENSMUST00000216052 2794 ntBASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarca2Q6DIC0 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms