Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Vps54Q5SPW0 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Vps54Q5SPW0 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.88□□□□□ -1.31
Vps54Q5SPW0 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.88□□□□□ -1.31
Vps54Q5SPW0 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.88□□□□□ -1.31
Vps54Q5SPW0 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Vps54Q5SPW0 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Vps54Q5SPW0 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.88□□□□□ -1.31
Vps54Q5SPW0 Robo2-210ENSMUST00000226478 8059 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gm22592-201ENSMUST00000104242 131 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gm4032-201ENSMUST00000210886 487 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Vps54Q5SPW0 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm11908-201ENSMUST00000117755 347 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm13245-201ENSMUST00000119646 260 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm7189-201ENSMUST00000119811 429 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm25152-201ENSMUST00000157117 114 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm26069-201ENSMUST00000157497 277 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm23774-201ENSMUST00000158990 131 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm3242-201ENSMUST00000171273 485 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Mir3572-201ENSMUST00000175549 86 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm31306-201ENSMUST00000197517 508 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm43456-201ENSMUST00000202519 457 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 LOC665443-201ENSMUST00000212284 796 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Vps54Q5SPW0 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Vps54Q5SPW0 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Vps54Q5SPW0 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Vps54Q5SPW0 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.85□□□□□ -1.31
Vps54Q5SPW0 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Vps54Q5SPW0 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.85□□□□□ -1.31
Vps54Q5SPW0 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.85□□□□□ -1.31
Vps54Q5SPW0 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.85□□□□□ -1.31
Vps54Q5SPW0 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.85□□□□□ -1.31
Vps54Q5SPW0 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Vps54Q5SPW0 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
Vps54Q5SPW0 Gm23910-201ENSMUST00000104597 132 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms