Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm43743-202ENSMUST00000198353 491 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm7890-201ENSMUST00000204877 601 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm5735-201ENSMUST00000207053 167 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm45596-201ENSMUST00000209279 434 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm16007-201ENSMUST00000117837 286 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm8545-201ENSMUST00000120692 801 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm24383-201ENSMUST00000122691 333 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm22636-201ENSMUST00000158142 275 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm37609-201ENSMUST00000191778 678 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm37716-201ENSMUST00000193553 947 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm42646-201ENSMUST00000202233 914 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm43501-201ENSMUST00000202513 107 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm18789-201ENSMUST00000216115 550 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Mir375-201ENSMUST00000083682 64 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.16□□□□□ -1.42
Upf3bQ3ULL6 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm15801-201ENSMUST00000120920 522 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm25660-201ENSMUST00000158470 104 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm8783-201ENSMUST00000159764 522 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm22690-201ENSMUST00000175054 110 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm24957-201ENSMUST00000179604 132 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm16531-201ENSMUST00000180658 967 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm31861-201ENSMUST00000204563 672 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.15□□□□□ -1.42
Upf3bQ3ULL6 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms