Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm43090-201ENSMUST00000202459 314 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm43967-201ENSMUST00000203787 301 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm44243-201ENSMUST00000204323 692 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm17820-201ENSMUST00000220213 1068 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm6436-201ENSMUST00000077163 451 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm6545-201ENSMUST00000217186 1786 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm12654-201ENSMUST00000120387 587 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm16411-201ENSMUST00000122164 1100 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm25342-201ENSMUST00000157459 122 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm26037-201ENSMUST00000158150 311 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm3123-201ENSMUST00000163480 480 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm23968-201ENSMUST00000175047 125 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm21542-201ENSMUST00000182307 993 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm5334-201ENSMUST00000187472 720 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Mir1892-201ENSMUST00000197752 80 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm42983-201ENSMUST00000199879 815 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm29778-201ENSMUST00000201667 466 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm2996-201ENSMUST00000211398 537 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 AC111046.1-201ENSMUST00000217715 412 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Nsa2-203ENSMUST00000225410 974 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 AC098742.1-201ENSMUST00000227945 373 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm5321-201ENSMUST00000072050 447 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm22971-201ENSMUST00000083305 97 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp39Q3TIX9 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Usp39Q3TIX9 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Usp39Q3TIX9 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Usp39Q3TIX9 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Usp39Q3TIX9 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Usp39Q3TIX9 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms