Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
Col8a1Q00780 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 AC154681.1-201ENSMUST00000225876 1735 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm44101-201ENSMUST00000203951 2221 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm14733-201ENSMUST00000117680 133 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm11984-201ENSMUST00000118142 766 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm11910-201ENSMUST00000121624 432 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm12618-201ENSMUST00000121754 483 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm14251-201ENSMUST00000122133 279 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm15116-201ENSMUST00000122248 663 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm22342-201ENSMUST00000122647 298 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm14651-201ENSMUST00000147192 442 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm23228-201ENSMUST00000157296 270 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm25550-201ENSMUST00000158079 128 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm22668-201ENSMUST00000158716 260 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm3140-201ENSMUST00000163523 481 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm4613-201ENSMUST00000165488 276 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm7426-201ENSMUST00000179046 404 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm26092-201ENSMUST00000179798 97 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Mir669a-1-201ENSMUST00000180238 97 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm29641-201ENSMUST00000188955 259 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm6693-201ENSMUST00000189583 813 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm29138-201ENSMUST00000191444 348 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm35323-201ENSMUST00000191836 499 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm37295-201ENSMUST00000192186 109 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm43227-201ENSMUST00000202239 677 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm44239-201ENSMUST00000204228 271 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 AC116726.2-201ENSMUST00000217629 986 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 CT009742.1-201ENSMUST00000222507 702 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 AC239878.2-201ENSMUST00000224048 464 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.77□□□□□ -1.49
Col8a1Q00780 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col8a1Q00780 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Col8a1Q00780 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms