Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm27887-201ENSMUST00000184367 102 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm2325-201ENSMUST00000186637 581 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm6137-201ENSMUST00000187552 578 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm44253-201ENSMUST00000203387 628 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm10709-201ENSMUST00000213318 480 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm23330-201ENSMUST00000082660 164 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx3-1P97436 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.1□□□□□ -1.59
Nkx3-1P97436 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm14836-201ENSMUST00000118567 471 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm13533-201ENSMUST00000121104 177 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm25906-201ENSMUST00000158489 126 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Mir7685-201ENSMUST00000183555 62 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm27679-201ENSMUST00000184612 84 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm38015-201ENSMUST00000193048 188 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm37358-201ENSMUST00000195492 479 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm8920-201ENSMUST00000196153 924 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm8412-201ENSMUST00000077493 440 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nkx3-1P97436 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.09□□□□□ -1.59
Nkx3-1P97436 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Nkx3-1P97436 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Nkx3-1P97436 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Nkx3-1P97436 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Nkx3-1P97436 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Nkx3-1P97436 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.09□□□□□ -1.6
Nkx3-1P97436 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Nkx3-1P97436 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.09□□□□□ -1.6
Nkx3-1P97436 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms