Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
PrkdcP97313 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PrkdcP97313 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 AC168056.3-201ENSMUST00000225395 2540 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm38372-201ENSMUST00000194854 4028 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PrkdcP97313 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PrkdcP97313 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Trav3-2-201ENSMUST00000198999 305 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Gm44580-201ENSMUST00000206333 877 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
PrkdcP97313 AC136376.1-201ENSMUST00000228496 950 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm13928-201ENSMUST00000120326 1732 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Gm24350-201ENSMUST00000104163 133 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm29474-201ENSMUST00000187688 379 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Gm2367-201ENSMUST00000192374 472 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Gm2429-201ENSMUST00000194635 586 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm37485-201ENSMUST00000192326 2953 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm45001-201ENSMUST00000208279 2515 ntBASIC3.82□□□□□ -1.8
PrkdcP97313 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
PrkdcP97313 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PrkdcP97313 Gm37553-201ENSMUST00000194135 1602 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm24265-201ENSMUST00000101833 141 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm12285-201ENSMUST00000117347 233 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm22122-201ENSMUST00000175147 200 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm24407-201ENSMUST00000177864 141 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm44673-201ENSMUST00000205692 996 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 AC155808.1-201ENSMUST00000219288 409 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 AC132433.1-201ENSMUST00000221553 1101 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
PrkdcP97313 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm45786-201ENSMUST00000213021 2278 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm44829-201ENSMUST00000208008 3193 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms