Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Lmo4P61969 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lmo4P61969 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Lmo4P61969 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lmo4P61969 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Lmo4P61969 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lmo4P61969 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lmo4P61969 Gm38029-201ENSMUST00000192669 2090 ntBASIC4.77□□□□□ -1.65
Lmo4P61969 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lmo4P61969 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Lmo4P61969 Gm44440-201ENSMUST00000203139 2373 ntBASIC4.77□□□□□ -1.65
Lmo4P61969 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lmo4P61969 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Lmo4P61969 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC4.77□□□□□ -1.65
Lmo4P61969 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Lmo4P61969 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Lmo4P61969 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm9894-201ENSMUST00000171257 2904 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm38224-201ENSMUST00000191648 2100 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 AC154630.1-201ENSMUST00000215334 2440 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm37342-201ENSMUST00000194588 4965 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Robo2-210ENSMUST00000226478 8059 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Lmo4P61969 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm14836-201ENSMUST00000118567 471 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm12303-201ENSMUST00000119506 673 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm13533-201ENSMUST00000121104 177 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm24382-201ENSMUST00000122698 107 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Lmo4P61969 Mir1970-201ENSMUST00000157839 104 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm29159-201ENSMUST00000187969 379 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm28188-201ENSMUST00000190483 236 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm28467-201ENSMUST00000190981 318 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm36999-201ENSMUST00000192756 1046 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm38015-201ENSMUST00000193048 188 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm37676-201ENSMUST00000195496 507 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm43516-201ENSMUST00000196891 322 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm7733-201ENSMUST00000199038 919 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm6070-201ENSMUST00000207275 419 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
Lmo4P61969 AC171206.1-201ENSMUST00000213612 213 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm4012-201ENSMUST00000221504 581 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 AC123658.1-201ENSMUST00000228364 867 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm22005-201ENSMUST00000082795 141 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm37926-201ENSMUST00000191922 2424 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 AC144733.2-201ENSMUST00000222552 2292 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm42940-201ENSMUST00000200361 2362 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC4.76□□□□□ -1.65
Lmo4P61969 Gm14912-201ENSMUST00000120166 1773 ntBASIC4.76□□□□□ -1.65
Lmo4P61969 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lmo4P61969 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lmo4P61969 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Lmo4P61969 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lmo4P61969 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lmo4P61969 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lmo4P61969 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms