Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.66□□□□□ -1.5
Sox3P53784 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm22420-201ENSMUST00000178795 126 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm28017-201ENSMUST00000183434 126 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.66□□□□□ -1.5
Sox3P53784 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Gm37477-201ENSMUST00000195215 884 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm19060-201ENSMUST00000201959 421 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm45032-201ENSMUST00000205375 520 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.66□□□□□ -1.5
Sox3P53784 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.66□□□□□ -1.5
Sox3P53784 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.66□□□□□ -1.5
Sox3P53784 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox3P53784 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.66□□□□□ -1.5
Sox3P53784 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sox3P53784 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Sox3P53784 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox3P53784 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.66□□□□□ -1.5
Sox3P53784 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Sox3P53784 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Sox3P53784 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox3P53784 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox3P53784 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox3P53784 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.65□□□□□ -1.5
Sox3P53784 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sox3P53784 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox3P53784 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Sox3P53784 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox3P53784 Gm11617-201ENSMUST00000119609 639 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Gm14267-201ENSMUST00000119751 496 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.65□□□□□ -1.5
Sox3P53784 Gm23149-201ENSMUST00000158837 230 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Gm16269-201ENSMUST00000160532 409 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox3P53784 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox3P53784 Mirt2-201ENSMUST00000175179 285 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Gm16531-201ENSMUST00000180658 967 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sox3P53784 Gm37376-201ENSMUST00000192176 453 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Gm18007-201ENSMUST00000205019 844 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Gm44683-201ENSMUST00000209088 484 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Gm17994-201ENSMUST00000209260 533 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.65□□□□□ -1.5
Sox3P53784 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.65□□□□□ -1.5
Sox3P53784 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.65□□□□□ -1.5
Sox3P53784 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox3P53784 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox3P53784 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox3P53784 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox3P53784 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox3P53784 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.65□□□□□ -1.51
Sox3P53784 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.65□□□□□ -1.51
Sox3P53784 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox3P53784 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
Sox3P53784 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.65□□□□□ -1.51
Sox3P53784 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Sox3P53784 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox3P53784 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.64□□□□□ -1.51
Sox3P53784 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox3P53784 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Sox3P53784 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Sox3P53784 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.64□□□□□ -1.51
Sox3P53784 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox3P53784 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox3P53784 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 Gm14173-201ENSMUST00000117690 278 ntBASIC5.64□□□□□ -1.51
Sox3P53784 Gm8692-201ENSMUST00000118102 438 ntBASIC5.64□□□□□ -1.51
Sox3P53784 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sox3P53784 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox3P53784 Gm23280-201ENSMUST00000157905 139 ntBASIC5.64□□□□□ -1.51
Sox3P53784 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.64□□□□□ -1.51
Sox3P53784 Gm24303-201ENSMUST00000178237 126 ntBASIC5.64□□□□□ -1.51
Sox3P53784 Mir6963-201ENSMUST00000183535 71 ntBASIC5.64□□□□□ -1.51
Sox3P53784 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.64□□□□□ -1.51
Sox3P53784 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox3P53784 Gm43712-201ENSMUST00000198020 291 ntBASIC5.64□□□□□ -1.51
Sox3P53784 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.64□□□□□ -1.51
Sox3P53784 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.64□□□□□ -1.51
Sox3P53784 Gm9237-201ENSMUST00000221499 548 ntBASIC5.64□□□□□ -1.51
Sox3P53784 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Sox3P53784 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Sox3P53784 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms