Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.01□□□□□ -1.29
Sox1P53783 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Gm19256-201ENSMUST00000218550 231 ntBASIC7.01□□□□□ -1.29
Sox1P53783 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.01□□□□□ -1.29
Sox1P53783 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Gm18592-201ENSMUST00000221529 276 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm18940-201ENSMUST00000222518 871 ntBASIC7.01□□□□□ -1.29
Sox1P53783 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.01□□□□□ -1.29
Sox1P53783 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.01□□□□□ -1.29
Sox1P53783 CT030662.3-201ENSMUST00000228751 476 ntBASIC7.01□□□□□ -1.29
Sox1P53783 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.01□□□□□ -1.29
Sox1P53783 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Sox1P53783 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Sox1P53783 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Snora21-201ENSMUST00000082967 137 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Sox1P53783 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Sox1P53783 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Sox1P53783 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.01□□□□□ -1.29
Sox1P53783 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.01□□□□□ -1.29
Sox1P53783 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.01□□□□□ -1.29
Sox1P53783 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox1P53783 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Gm45001-201ENSMUST00000208279 2515 ntBASIC7□□□□□ -1.29
Sox1P53783 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Sox1P53783 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Sox1P53783 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Mir190b-201ENSMUST00000104803 80 ntBASIC7□□□□□ -1.29
Sox1P53783 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
Sox1P53783 Gm12814-201ENSMUST00000117091 846 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm14981-201ENSMUST00000117325 943 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm8812-201ENSMUST00000118496 412 ntBASIC7□□□□□ -1.29
Sox1P53783 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC7□□□□□ -1.29
Sox1P53783 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm24517-201ENSMUST00000122560 107 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Gm7654-201ENSMUST00000186738 683 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm21803-201ENSMUST00000188897 693 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Gm28567-201ENSMUST00000190270 693 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Gm36638-201ENSMUST00000193295 400 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm37044-201ENSMUST00000193531 693 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm38369-201ENSMUST00000195101 693 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm9245-201ENSMUST00000200528 983 ntBASIC7□□□□□ -1.29
Sox1P53783 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Sox1P53783 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC7□□□□□ -1.29
Sox1P53783 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 AC164424.1-201ENSMUST00000221690 170 ntBASIC7□□□□□ -1.29
Sox1P53783 AC154595.2-201ENSMUST00000225067 310 ntBASIC7□□□□□ -1.29
Sox1P53783 AC112142.1-206ENSMUST00000228136 982 ntBASIC7□□□□□ -1.29
Sox1P53783 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC7□□□□□ -1.29
Sox1P53783 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC7□□□□□ -1.29
Sox1P53783 Rybp-ps-201ENSMUST00000069489 681 ntBASIC7□□□□□ -1.29
Sox1P53783 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC7□□□□□ -1.29
Sox1P53783 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 mt-Tr-201ENSMUST00000082412 68 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm25404-201ENSMUST00000082970 107 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm44950-201ENSMUST00000206403 2296 ntBASIC7□□□□□ -1.29
Sox1P53783 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Sox1P53783 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Sox1P53783 Gm38302-201ENSMUST00000191676 2076 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm37496-201ENSMUST00000191930 2509 ntBASIC7□□□□□ -1.29
Sox1P53783 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Sox1P53783 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 Gm43523-201ENSMUST00000197397 2878 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm37499-201ENSMUST00000194683 3478 ntBASIC7□□□□□ -1.29
Sox1P53783 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Sox1P53783 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms